Several new instruments have been designed using a recently developed theor. approach for optimizing the performance of each of the major elements of a time-of-flight (TOF) mass spectrometer.The major emphasis in the design and construction of these instrument is on biol. applications employing Matrix Assisted Laser Desorption/Ionization (MALDI).The optimized elements include one and two-stage MALDI ion sources, two-stage ion mirrors, both gridded and gridless, timed-ion selectors, ion focusing and deflecting elements, pulsed and static ion accelerators, ion fragmentors, and ion detectors.Prototype instruments were constructed to allow performance of each of these elements to be evaluated and compared with theor. predictions.Recent results demonstrating the performance of these instruments for selected biol. applications are summarized.