ObjectiveThe brain-derived neurotrophic factor (BDNF) playing a crucial role in neuron survival and function, particularly in neurodegenerative diseases like Alzheimer's disease (AD). Our study seeks to explore polymorphisms in miRNAs that regulate the BDNF gene in individuals with AD, and to reveal the relationship between these polymorphisms and APOE genotypes.MethodsSeventy AD patients who applied to the Psychiatry outpatient clinic were recruited for the study as well as 70 healthy individuals in the same age. The cases were examined for 5 miRNAs regulating BDNF and 2 APOE SNPs using the SNPType method on the Fluidigm platform.ResultsIn comparisons of the genotype distributions for three polymorphisms (miR-206 rs16882131, miR-30e rs112439044, miR-26b rs188612260) (p < 0.01 all) and the allele frequencies for two polymorphisms (miR-30e rs112439044, miR-26b rs188612260) (p < 0.01) detected significant differences between groups. While the APOE e4/e4 genotype was detected in 4.50% of the AD group, no individual with this genotype was observed in the control group. When the correlation between miRNA polymorphisms and APOE genotypic distributions were investigated, the miR-30e rs10489167 polymorphism showed a statistically significant positive correlation with the ε2/ε2 genotype and a statistically significant negative correlation with the e2/e3 genotype (p < 0.08 and p < 0.001, respectively). On the other hand, the miR-30e rs112439044 polymorphism exhibited a statistically significant positive correlation with the e2/e2 and ε2/ε2 genotypes (p < 0.03 and p < 0.07, respectively).ConclusionThese findings could potentially offer insights into the mechanisms underlying AD.