The problem of arsenic contamination is widespread, posing serious risks to both human health and crop productivity. Therefore, eco-friendly strategies are urgently needed to reduce metal stress-related yield losses and minimize its impacts on human health. Although the roles of nitric oxide (NO) and indole-3-acetic acid (IAA) in combating abiotic stresses, including metal toxicity, have been reported, the mechanisms underlying their interaction remain unclear. This study investigates whether IAA and NO function through shared or independent signaling pathways in regulating arsenate [As(V)] toxicity in tomato seedlings. Results showed that As(V) stress reduced dry weight, increased arsenic and tannin accumulation, suppressed auxin transport, signaling, and IAA content, and disrupted internal root structures. As(V) also induced oxidative stress, reduced stomatal frequency, suppressed glutathione biosynthesis, nitrogen metabolism, and the ascorbate-glutathione cycle, ultimately causing membrane damage. Application of a NO scavenger [2-(4-carboxyphenyl)-4,4,5,5 tetramethylimidazoline-1-oxyl-3-oxide] did not exacerbate As(V) stress in the presence of IAA. In contrast, a polar auxin transport inhibitor [2,3,5-triiodobenzoic acid, TIBA] intensified As(V) toxicity even in the presence of NO. Interestingly, addition of IAA reversed the negative effects of TIBA, suggesting that IAA acts downstream of NO in a signaling pathway that mitigates As(V) toxicity. These findings are promising, as both IAA and NO are inexpensive and could be applied to manage As(V) stress in non-waterlogged arsenic-contaminated soils, where As(V) is the dominant arsenic species under field conditions. Furthermore, biochemical markers associated with As(V) tolerance could aid in developing arsenic-tolerant tomato cultivars using advanced molecular genetic tools, thereby ensuring food security and safety.